Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | -------MNVLQSMKMAWKQLKASKLRSFLTMLGIIIGVASVILLVSLGNGVTQEVDDQ-------MGDLGSNLITVV------NSSVNPNDKYTYDEVMKYQNIDGVKSVSPELSGQVNATFDYKNSSNKVIGTNDQYKAARSLEMKEGRFLLPIDTEYGQKVAVIGSTVASDLFGFGDPIGETIRLNGMPYKVVGVLKEKGASMM-----GSSDDQIFIPISSAQRL----LKDTNVRTIYVETKSAEDVDFVVNTLESRLAIKFGDEKEQEKNASSAQMGPSYQVINQQEILNAF----------------NTISTTLTTA--LGAIAAISLVVGGIGIMNIMLVSVSERTREIGIRKALGA------------------KKRAILLQFLIE------SIVIS--VCGGVIGIIIGVSGALIFGSVAGISSGITAGTIIFSFV---FSLCIGVIFGIA-----PANKASKLRP---IDALRSE--------------------------- |
| 4JE5 Chain:A ((5-502)) | TLPESKDFSYLFSDETNAR--KPSPLKLFQDPNIIFLGGGLPLKDYFPWDNLSVDSPKPPFPQGIGAPIDEQNCIKYTVNKDYADKSANPSNDIPLSRALQYGFSAGQPELLNFIRDHTKIIHDLKYKDWDVLATAGNTNAWEST--------LRVFCNRGDVILVEAHSFSSSLASAEAQGVITFPV---PIDADGIIPEKLAKVMENWTPGAPKPKLLYTIPTGQNPTGTSIADHRKEAIY---KIAQKYDFLIVEDEPYYFLQMNPYIKDLKEREKAQSSPKQ---DHDEFLKSLANTFLSLDTEGRVIRMDSFSKVLAPGTRLGWITGSSKILKPYLSLHEMTIQAPAGFTQVLVNATLSRWGQKGYLDWLLGLRHEYTLKRDCAIDALYKYLPQSDAFVINPPIAGMFFTVNIDASVHPEFKTKYNSDPYQLEQSLYHKVVERGVLVVPGSWFKSEGETEPPQPAESKEVSNPNIIFFRGTYAAVSPEKLTEGLKRLGDTLYEEFGIS |
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General information:
TITO was launched using:
| RESULT:
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Template: 4JE5.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -88902 for 2705 contacts (-32.9/contact) +
2D Compatibility (PS) -40233 + (NN) 5075 + (LL) 1832
1D Compatibility (HY) -13600 + (ID) 3750
Total energy: -139578.0 ( -51.60 by residue)
QMean score : 0.173
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