Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MQVTDVRLRRVETDGRMRAIASITLDEEFVVHDIRVIDGNNGLFVAMPSKRGVDGEFRDIAHPINSDTRAKIQEVVLAEYERVGEEEATAVTEEESESVSAE
1LLD Chain:A ((272-308))
----------------------------------------SDICMSVPTLLNRQGVNNTINTPVSDKELAALKRSAE-------------------------
General information:
TITO was launched using:
RESULT:
Template:
1LLD.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -6118 for 149 contacts (-41.1/contact) +
2D Compatibility (PS) -3889 + (NN) 407 + (LL) 5788
1D Compatibility (HY) -800 + (ID) 250
Total energy: -4862.0 ( -32.63 by residue)
QMean score : 0.363
(partial model without unconserved sides chains):
PDB file :
Tito_1LLD.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1LLD-query.scw
PDB file :
Tito_Scwrl_1LLD.pdb
: