Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MATTLEVQKRETTQHSEVTRLRSEGKVPGIIYGYKSENVPVSVDSLELIKAVRDNGRNAVFSVTVDG-KKLNVLLHEYQVDPLKDVLVHVDLLAVDMNEEVETDVRVVLVGDAPGVKAGGVLQQIIHDVKVSA-TPEKLPETIELDISSLEIGDVLTTNDLPENKDYVVQAEEEETVVTVSAPRAEEEPTTTEAPEPEAVHGKDEEPVE
4IO9 Chain:S ((16-175))
-----------------------ESMIAAVAYN-KENNVSFALDRKAFDRAFRQQSTTGLFDITVEGGETFPALVKAVQMDKRKRAPIHVDFYMVTYGEPVEVSVPVHTTGRSQGEVQGGLVDIVVHNLQIVAPGPRRIPQELVVDVTKMNIGDHITAGDIKLPEGCTLAADPELTVVSVLPPR-------------------------
General information:
TITO was launched using:
RESULT:
Template:
4IO9.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -84426 for 1043 contacts (-80.9/contact) +
2D Compatibility (PS) -17494 + (NN) -6938 + (LL) 3552
1D Compatibility (HY) -12800 + (ID) 2350
Total energy: -120456.0 ( -115.49 by residue)
QMean score : 0.440
(partial model without unconserved sides chains):
PDB file :
Tito_4IO9.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4IO9-query.scw
PDB file :
Tito_Scwrl_4IO9.pdb
: