Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | --VSERSM--------KRLMKGAAWLTAASLISKILSAIYRVPFQNMVGDVGFYIFQQVYPIYGIAMTLALGGFPVVISKMLAEAEGDVRRQQIIMRAVSRMLRIVSIVIFAFLFLFANLIAIMMGDPALSELIRVISFVFLLMPQLAFMRGFFQGEGDMIPTAISQ--------TVEQIIRVA-----IILIGAGLA----LHFNFDLYDA------GSMAMSGA---FFGGVSGIFILRHFYNKKVRLGEGIQPAVFTNKEEK--VGIGRTFLRQSVAICVVSSMLILFQLVDSFQVYRLMSDSG--IPDFIAKSLKGVYDRGQPILQLGLVISTGLALALVPMITAAR-----VQGQQKELKRSVLLAIKITLILSGAETIGLIVIMRPLNQMLFQTPDGTFVLQLF----MPAVFLSSLIIMLSSILQGFGKIAVPAVGVGIGLIVKWVTGGILIPRLATVGASVSTCVGLLVILLICYVSLK--QTIRVPFVEKTMLFRLVAALVLMAVFPCLFEWLAPLDTRLGSAFQAIVSALVGGGIFLVFALRYKLLG-PKDFVFLPFGSKLLALSKLVARK |
| 4K3C Chain:A ((1-532)) | YNISEMRIIGDTQKLDNELNQLLTHFKAGQLFRKTELSIIEEQIKQILGDRGY------------------GSAKVDLYPKFNEEDHTVQINFIVDAGRRIYVRKIRFEGND-----------VTADSTLRREMRQQEGAWLSTSAVSLAKSRLERTGFYETVEMSMPTVKNTDDQVDIIYKIKERNTGSINFGVGYGSGSGLSYNAGITQDNFLGMGSSLGLNGSRNTDSTNVNLSYTEPYFTKDGVSLGGNIFYEDYDNSARKASAAYKRKTYGASGTLGFPVDENNSYYLGLGYTHDKLRNVEREYTREKYVNSMK--FPINPQNSHYDRIQSADFDLSFGWNYNNLNRGYFPTAGSSANISGKLTLPGSDNKYYQVGTNFSGYIPLNSEHKWVIATKGGLAYTNSFGGKEVPFYQLYSAGGMGS--LRGF---AGGSIGP---KAIYYREDGFKAPSQDVIGGNAMVNASLELIIPAPFISDKYQHNVRTSVFVDAATVWNTKWKQSKADYPNLPDFGDYKRVRASAGIALQWQSPIGPLSFSYAKPIKKYAGDEIEQFQFTVGSTF---------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4K3C.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -333761 for 3436 contacts (-97.1/contact) +
2D Compatibility (PS) -49587 + (NN) 20432 + (LL) 4940
1D Compatibility (HY) -400 + (ID) 4000
Total energy: -362376.0 ( -105.46 by residue)
QMean score : 0.033
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