Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKNISDIIEAYLKQVLESSEAVEIKRSEIADKFECVPSQINYVINTRFTMERGYIVESKRGGGGYIRIIKVKMNDKLQLLEAIISMVHDKKVSQSFSED---VILRLLEEEVITKKEARLMVAALDREVLILPLPDRDILRSRILEAMLVALKYD
4ETW Chain:A ((130-180))
---------------------------------------------------------------------------------------------QQLSDDFQRTVERFLALQTMGTETARQDARALKKTVLALPMPEVDVLNGGL-----------
General information:
TITO was launched using:
RESULT:
Template:
4ETW.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -13622 for 237 contacts (-57.5/contact) +
2D Compatibility (PS) -5374 + (NN) -5521 + (LL) 9300
1D Compatibility (HY) -2400 + (ID) 800
Total energy: -18417.0 ( -77.71 by residue)
QMean score : 0.419
(partial model without unconserved sides chains):
PDB file :
Tito_4ETW.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4ETW-query.scw
PDB file :
Tito_Scwrl_4ETW.pdb
: