Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MNVFEPRL--------SSWLENAGDDDDVVLSSRIRLARNLKDEQFPIYEQKEEI--VDNIA----EVFDDNFI--LIKMNQISLLQKALLVEKHL-----ISPYMM------NKSEYGAVLLNEEENVSIMLNEEDHLRIQCMTPG---LRLFDALEAAL-QIDGYVEEK-LSYAFDKEFGYLTSCVTNIGTGMRASVMVHLPGLVTTKRIKSVIEAIRSLGFVVRGIYGEGSMPASNIFQVSNQVTLGKTEAEIVEDLTQVMEQIIMQERVARTTLKQKFHIALEDRVFRSYGLLMNCRIISMKEAADAISDIRFGVELGFFEHISRQKMNELVLFSQPAFLRREAGRDMDELEEKVIRAKVIREILGDK |
| 4Z9M Chain:A ((108-361)) | -NGYDPRVMKHTTDLDASKITQGQFDEHYVLSSRVRTGRSIRGLSLPPACTRAERREVENVAITALEGLKGDLAGRYYKLSEMTEQDQQRLIDDHFLFDKPVSPLLTCAGMARDWPDARGIWHNYDKTFLIWINEEDHTRVISMEKGGNMKRVFERFCRGLKEVERLIQERGWEFMWNERLGYILTCPSNLGTGLRAGVHVRIPKLSKDPRFSKILENLR---LQKRGTGGVDTAAVADVYDISNIDRIGRSEVELVQ------------------------------------------------------------------------------------------------------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 4Z9M.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -88839 for 1563 contacts (-56.8/contact) +
2D Compatibility (PS) -23635 + (NN) -6074 + (LL) 11208
1D Compatibility (HY) -14400 + (ID) 3100
Total energy: -124840.0 ( -79.87 by residue)
QMean score : 0.361
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