Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MDKAKQIYLEFKREADFLELDFPLFLGDGPGFGELCMDYSEQDGYMLYGYEHGKRNSEFKTTDF-DEFKYEVFLHICWYMGMEFELRHRKEDIERDDNILETDTRKIAFEKTLQLLKMVNPAWIDKAAIGYSNYLNLWRKNKNVYFDKEAMQFKVNL
1OZ9 Chain:A ((85-148))
-------------------------------------------GDVVISQDTAERQARELGHSLEEEVKRLIVHGIVHLLGYD----HEKG----------GEEEKKFRELENYVLSKLSK------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
1OZ9.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -14034 for 343 contacts (-40.9/contact) +
2D Compatibility (PS) -6777 + (NN) -4423 + (LL) 6408
1D Compatibility (HY) -2000 + (ID) 550
Total energy: -21376.0 ( -62.32 by residue)
QMean score : 0.180
(partial model without unconserved sides chains):
PDB file :
Tito_1OZ9.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1OZ9-query.scw
PDB file :
Tito_Scwrl_1OZ9.pdb
: