Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKKLIIVMLTIFTAVLVVGCSGTGTADKAETKKETTKESKQANAVKKEVKEMKSNLDDVKKAISDKDKSALQSSAAELHKHWLEFENNVRDLYPLQYTDVEKYETPIFYESKNDNPNFDTLNDNATGLDGALDTLEKAKETKAKTSEVLDKAVDNYSKYVTEQVDEFVAQTEIFTNAV--KSGDIEKAKAAYVSPRLNYERIEPIAESFG-----DLDPKIDARINDVEN-----------------------EADWTGFHVIERALWEKKSL-----EGMDVYADKLLTDAKALQAEVKNLK-------------LEPKPMVAGAMELLNEAATTKIT-----------GEEEAYSHTDLDDLNANVEGSKVVYQA--IIPALNAQDK-KLADQIDAAFNKMEDTLANYKNGDSFVLYTTLTKDQIRDISDQLSHLSELMAQTGKIF |
| 3PF0 Chain:A ((95-372)) | ---------------------------------------------------------------------------------------------------------------------------------------------------------------AAKQSDLLHDLAQKHCQKAPVSGDELQALRDQWLVLAQAWASAEMV--NFGPATASMSNLYINYYPDERGLVHGGVADLITANPALTAEQLANESAVVQGIPGLEEALYANDSLDAGQCAYVMSASSALGTRLKDIEKNWQQNAIKLLAIDKTAESDQGLNQWFNSLLSLVETMKSNAIEQPLGLSGKAKGHLPAATAGQSRAIINAKLATLNKAMTDPVLTAILGSNNENTVADTLSTALADTTALLAQMP-----EDLATADKATQQELYDHLTNITRLIKSQ---- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3PF0.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 70953 for 1442 contacts (49.2/contact) +
2D Compatibility (PS) -21723 + (NN) -1129 + (LL) 11028
1D Compatibility (HY) 13200 + (ID) 750
Total energy: 71579.0 ( 49.64 by residue)
QMean score : 0.220
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