Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MNLKKHSERKFDLITVGRACIDLNA---VEYNRPMEETMTFSKYVGGSPANIAIGTAKLGLKVGFIGKISDDQHGRFIEKYMRDLAINTDGMVKDTEGRKVGLAFTEIKSPDECSILMYRENVADLYLTPEEISEDYIKEARVLLISGTALAQSPSREAVLKAVSLARKNDVVVAFELDYRPYTWKNSEETAVYYSLVAEQADVIIGTRDEFDMMENQVGGKNEATKAYLFQHQAKIVVIKHGVEGSFAYTK--AGETFQAQAYKTKVLKTFGAGDSYASAFLYGL---FSD-----------ESIETALKYGSAAASIVVSKHSSSDAMPTADEIKALIAQAE |
| 3LJS Chain:A ((7-326)) | ------------ILCFGEALIDMLAQPLVKKGMPR----AFLQCAGGAPANVAVAVARLGGAVQFVGMLGSDMFGDFLFDSFAEAGVVTDGIVR-TSTAKTALAFVALDAHGERSFSFYRPPAADLLFRVEHFQDASFSDALIFHACSNSMTDADIAEVTFEGMRRAQAAGAIVSFDLNFRPMLWPNGENPASRLWKGLSLADVVKLSSEELDYLANTLAADANAVIQQLWQGRAQLLLVTDAAGPVHWYTRTAGGEV---PT-----------GDAFVGGMLYTFAQQFDDAAALIDFCHDPESIVSTLRFAAAVGALAV----AFTAMPMLSEVLSLI---- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3LJS.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -165746 for 2376 contacts (-69.8/contact) +
2D Compatibility (PS) -30950 + (NN) -10750 + (LL) 2984
1D Compatibility (HY) -19600 + (ID) 4200
Total energy: -228262.0 ( -96.07 by residue)
QMean score : 0.502
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