Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MEVFAEYLAEIENPDHRARTQEVLTWVAETFPDLKPEIK--------WNTPMFTNNGTFIIGFSIAKQHMSVSPEVAGIERFEADIKEAGYSHTKGIFRITWAKSVDYDLLAKIIKFNIQDKANYTSFWRV |
1AMZ Chain:A ((260-319)) | ---FAAAMNGLAGPLHGLANQEVLLWLSQLQKDLGADASDEKLRDYIWNT---LNSGRVVPGYGHA----------------------------------------------------------------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 1AMZ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) 826 for 240 contacts (3.4/contact) +
2D Compatibility (PS) -5450 + (NN) -3121 + (LL) 5828
1D Compatibility (HY) -2800 + (ID) 900
Total energy: -5617.0 ( -23.40 by residue)
QMean score : 0.302
|
|
|