Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MIEKTIMERRSIKKANDEPISRETVNTILEQAAYAPFHSKVEPWNVYVLHTLAEKERYIEKIIEFNEREQGVSFSEAEIADLK---AGYAKKII-TPPYLLIVTTNIIG---HGKKDFESIGATSAFIQNIQLLGWEAGIGMIWRSNRFI-FDAKFADDLGIPAEQKIVGTL---HLTSLAEVPEAKPRRPLNEWVKNLADL
4TTC Chain:A ((69-254))
-------KRRSVRFISNEQVPMEVIDNVIRTAGTAPSGAHTEPWTFVVVKDPDVKHKIRKIIEEEEEINYMKRMGHRWVTDLKKLRTNWIKEYLDTAPILILIFKQVHGFAANGKKKVHYYNEISVSIACGILLAALQNAGLVTVTTTPLNCGPRLRVLLGRPAHEKLLMLLPVGYPSKEATVPDLK-RKPLDQ--------
General information:
TITO was launched using:
RESULT:
Template:
4TTC.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -44581 for 1225 contacts (-36.4/contact) +
2D Compatibility (PS) -18886 + (NN) -5912 + (LL) 1656
1D Compatibility (HY) -8800 + (ID) 2250
Total energy: -78773.0 ( -64.30 by residue)
QMean score : 0.571
(partial model without unconserved sides chains):
PDB file :
Tito_4TTC.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4TTC-query.scw
PDB file :
Tito_Scwrl_4TTC.pdb
: