Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MNIVLIASLIFIAQTCLGFFQVKYYQHHMNKVANKYAGKIGYHLYSEMERLKFRTSAVAILVVNENHIVHECQILTGKTVFAQ--FKTFTNYHHKELSEILTELSSKNKNTIQEKAIIKTV-------NSCMKAL |
2W0C Chain:T ((1-127)) | MANFLTKNFVWILAAGVGVWFYQKADNAAKTATKPIA--------DFLAELQFLVNGSNYVKFPNAGFVLTRDALQDDFIAYDDRIKAWLGTHDRHKDFLAEILDHERRVKPVYRKLIGNIIDASTIRAASGVEL |
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General information:
TITO was launched using:
| RESULT:
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Template: 2W0C.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 657 for 496 contacts (1.3/contact) +
2D Compatibility (PS) -11791 + (NN) 2664 + (LL) 328
1D Compatibility (HY) -4800 + (ID) 700
Total energy: -13642.0 ( -27.50 by residue)
QMean score : 0.107
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