Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | VSSVHKVASISLFTLAWPIFLEQFLRLMISYIDVFMLGHYSD-DAVAATGVANQILVISIIIYGFISVGVQIIVAQMIGAKKHKEIENVITNGLVVAFLIGIVMSIIFIFMSKNFLTWMGIDPHLVQVGAPFLEIIGGSSVVIAIHASIL-PIL----------------RAHGYVRQSILVPVTISIINVVGNYLFLYGPLAYLDYGVAGVGISTAVANFVGMGLAI-WMLRKYIGYTFHFKKLEQVSKKLLYSILRLGLPSAGENLSYAGSQLVVTAIIAILGTEALTTKVYA--STVSQFVALFAIALGQASQIIIGRAVGAKEIDKAYKQGLRSWKIGLVVAIVVSVSIYLFAEPIMRLFTTNTEIIAMTKELFLLSIFLELGRATNIIIISSLNSTGDVRFPFICGLIVMWIVSLPFSYVLGISAGLGLVGVWLAYIIDEGVRAVLMYRRWRSKVWSLKSVI |
| 4LZ9 Chain:A ((17-353)) | -----------LRSLSIPAMIGMFVMALYNVVDTIFISYAVGIEGVAGVTIAFPIMMIMMSMAGALGIGGASVISRRLGERRGEEANQVFGNILTVI----LVLSVIG-FISA--FTLLG----------PALQLFGATSVTQGYATDYLFPILLGSIFFFFAFAANNIIRSEGNATFAMVTMIVPAVLNILLDVLFIFG----LNMGVLGASIATVIAQASVTGLVLRYFLTGKSTLSLHWSDL-RMKGSVIKEVCLVGLPAFVQQSSASLMMIAINSMLLRFGSD-FYVGVFGLVQRIMMFVMMPMMGIMQAMQPIVGYNYGAKQYSRLRETVMLGFKVATIFSIGIFALLMLFPEALLRVFTADREVI------------------------------------------------------------------------------------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 4LZ9.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -5521649 for 40186 contacts (-137.4/contact) +
2D Compatibility (PS) -28143 + (NN) 7626 + (LL) 11792
1D Compatibility (HY) -4000 + (ID) 1050
Total energy: -5535424.0 ( -137.75 by residue)
QMean score : ?
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