Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKAVVIENYGGKEELKEKEVAMPKAGKNQVIVKEAATSINPIDWKLREGYLKQMMDWEFPIILGWDVAGVISEVGEGVTDWKVGDEVFARPETT--RFGTYAEYTAVDDHLLAPLPEGISFDEAASIPLAGLTAWQALFDHAKLQKGEKVLIHAGAGGVGTLAIQLAKHAGAEVITTASAKNHELLKSLGADQVIDYKEVNFKDVLSD------IDVVFDTMGGQIETDSYDVLKEGTGRLVSIVGISNEDRA--KEKNVTATGIW----------LQPNGEQLKELGKLLANKTIKPIVGA-TFPFSEKG-VFDAHALSETHHAVGKIVISFNK |
| 3GAZ Chain:A ((10-317)) | --AAVVEEANGPFVLRK--LARPQPAPGQVLVQIEASGTNPLDAKIRAGEAPHAQQ-PLPAILGMDLAGTVVAVGPEVDSFRVGDAVFGLTGGVGGLQGTHAQFAAVDARLLASKPAALTMRQASVLPLVFITAWEGLVDRAQVQDGQTVLIQGGGGGVGHVAIQIALARGARVFATARGSDLEYVRDLGATPIDASREP--EDYAAEHTAGQGFDLVYDTLGGPVLDASFSAVKR-FGHVVSCLGWGTHKLAPLSFKQATYSGVFTLHTLLANEGLAHFGEMLREADALVQTGKLAPRLDPRTFSIAEIGSAYDA------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3GAZ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -108302 for 2522 contacts (-42.9/contact) +
2D Compatibility (PS) -30521 + (NN) -3792 + (LL) 1972
1D Compatibility (HY) -19600 + (ID) 5250
Total energy: -165493.0 ( -65.62 by residue)
QMean score : 0.560
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