Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MAKAKYEENFKKSLVALYRR--GKTKHSICQEFNVPHSTFGKWIKKFNNEENIES----N-EILNILQAQELKKQRVLLEEELSILTEAIAVFENPLPKNK
2JN6 Chain:A ((1-89))
MPTKTYSEEFKRDAVALYENSDGASLQQIANDLGINRVTLKNWIIKYGS-NHNVQGTTPSAAVSEAEQIRQLKKENALQRARTRHPAESC-----------
General information:
TITO was launched using:
RESULT:
Template:
2JN6.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -1954 for 439 contacts (-4.5/contact) +
2D Compatibility (PS) -8225 + (NN) 437 + (LL) 540
1D Compatibility (HY) -2400 + (ID) 1050
Total energy: -12652.0 ( -28.82 by residue)
QMean score : 0.465
(partial model without unconserved sides chains):
PDB file :
Tito_2JN6.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2JN6-query.scw
PDB file :
Tito_Scwrl_2JN6.pdb
: