Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MYIEIYTVNGESIRLDDDAKINNISIHELSKADLKNLFNEKCIELTKYDLTYFINTNQVNWFLVSEGIH
1BAZ Chain:A ((21-47))
-------------LVRKVAEENGRSVNSEIYQRVMESFKK-----------------------------
General information:
TITO was launched using:
RESULT:
Template:
1BAZ.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 3264 for 126 contacts (25.9/contact) +
2D Compatibility (PS) -2993 + (NN) -1943 + (LL) 3500
1D Compatibility (HY) 0 + (ID) 200
Total energy: 1628.0 ( 12.92 by residue)
QMean score : 0.370
(partial model without unconserved sides chains):
PDB file :
Tito_1BAZ.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1BAZ-query.scw
PDB file :
Tito_Scwrl_1BAZ.pdb
: