Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MLNENIKAIRKSKGLSQEEIAIKLNVVRQTISKWEQGLSVPDSDMLISISEVLETPVSTLLGETVMVSKVDDVKAISEKLEIINLQFAQRKTARRKMLYWLFVSLCAVIAIISAVFIILNSPYLGWDYSDPETSVIGVAFHTFEWLFVRLAPIILIGGVVGIFLTRKNV
2XJ3 Chain:A ((1-61))
MIINNLKLIREKKKISQSELAALLEVSRQTINGIEKNKYNPSLQLALKIAYYLNCPLEDIF------------------------------------------------------------------------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
2XJ3.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -24038 for 401 contacts (-59.9/contact) +
2D Compatibility (PS) -6487 + (NN) -1625 + (LL) 10132
1D Compatibility (HY) -5200 + (ID) 1050
Total energy: -28268.0 ( -70.49 by residue)
QMean score : 0.745
(partial model without unconserved sides chains):
PDB file :
Tito_2XJ3.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2XJ3-query.scw
PDB file :
Tito_Scwrl_2XJ3.pdb
: