Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MEEELEVIHKGLANAKNGFKAVPGKLYLTATYIVHKPNDYFDEEINIPLNRVAKIRGVRTKILGKELLSN-ILEIDMI--------------SGVKYQFVV--NKQKKWLEAVSEVLESRGESEKLG
2HTH Chain:B ((34-131))
-------------------KFDAGTLLLSTHRLIWRDQKNHECCMAILLSQIVFIEEQAAG-----IGKSAKIVVHLHPAPPNKEPGPFQSSKNSYIKLSFKEHGQIEFYRRLSEEMTQRRW-----
General information:
TITO was launched using:
RESULT:
Template:
2HTH.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -43840 for 446 contacts (-98.3/contact) +
2D Compatibility (PS) -8932 + (NN) -2205 + (LL) 1980
1D Compatibility (HY) -4000 + (ID) 550
Total energy: -57547.0 ( -129.03 by residue)
QMean score : 0.571
(partial model without unconserved sides chains):
PDB file :
Tito_2HTH.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2HTH-query.scw
PDB file :
Tito_Scwrl_2HTH.pdb
: