Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKKYRFLKFNINAGSVTLLVMFSSFFILSVILSTLLSMTWEFYAILSALVIVCFFNFKKFFPGEVAVSEEAFYYKSKAYPYSKYIIECDAKLIRFKSPSARAIPYYRIVIINKDTRAEKLIKVHNAARRYKGANTQMQVEMEELRDQLKQYQS |
| 4PAS Chain:B ((1-39)) | --------------------------------------------------------------------------------------------------------------SVNQASTSRLEGLQSENHHLRMKITELDKDLEEVTMQLQ---- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4PAS.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 5512 for 147 contacts (37.5/contact) +
2D Compatibility (PS) -4306 + (NN) -2318 + (LL) 10736
1D Compatibility (HY) -1600 + (ID) 300
Total energy: 7724.0 ( 52.54 by residue)
QMean score : 0.403
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