Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MYEKARQMMIEAHSGQVRKITGEPYFSHPLNVARILRRAGFREEVVVAGLLHDA---VEDTEMTDADIRATFGDEV--ADLVASHTENKTLSWEERKAHTIEQVRTGNLEEKALIVADK-LDNLTSVKYALSSEGKSVWSYFKRGYDLQKWYNQGIKNNMEYGLNPSEIPPFFDEYARLVKWIFKK
4MLN Chain:A ((32-124))
-------------------------LEHSLQCAYFAQRSGADNEMVLAALLHDLGHYCNDTSFEDMGGYGVWQHEKVGADYL------RGLGFSERVACLIE----GHVAAKRYLVSSKYLKNLS-------------------------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
4MLN.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -5591 for 488 contacts (-11.5/contact) +
2D Compatibility (PS) -8978 + (NN) -4351 + (LL) 6416
1D Compatibility (HY) -7600 + (ID) 1550
Total energy: -21654.0 ( -44.37 by residue)
QMean score : 0.187
(partial model without unconserved sides chains):
PDB file :
Tito_4MLN.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4MLN-query.scw
PDB file :
Tito_Scwrl_4MLN.pdb
: