Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceLNLKDTVKLANGVEMPRLGFGVWKVQDGDEAVNSVKWAIEAGYISIDTAAAYKNEEGVGQAIK----ESGIKREDLFVTTKLWNAEQGYESTLAAFDESLRKLELDYVDLYLIHWPVKGKFKDTWRAFEKLYKDKRVRAIGVCNFHEHHLKELMEDAEIAPMVNQIELHPQLTQEPLRKFCAENNIVVEAWSPLGNGK--LLSNPEIKAIADAHGKSVAQVILRWDLQIGVVTIPKSVHQERIIQNADIFDFELTEEEVAKISGLNKDERTGPDPDNFNF
1VP5 Chain:A ((18-278))------VTLNNGVEMPILGYGVFQIPP-EKTEECVYEAIKVGYRLIDTAASYMNEEGVGRAIKRAIDEGIVRREELFVTTKLWVSDVGYESTKKAFEKSLKKLQLEYIDLYLIHQPF-GDVHCAWKAMEEMYKDGLVRAIGVSNFYPDRLMDLMVHHEIVPAVNQIEIHPFYQRQEEIEFMRNYNIQPEAWGPFAEGRKNIFQNGVLRSIAEKYGKTVAQVILRWLTQKGIVAIPKTVRRERMKENISIFDFELTQEDMEKIATLDEGQ-----------


General information:
TITO was launched using:
RESULT:

Template: 1VP5.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -144456 for 2191 contacts (-65.9/contact) +
2D Compatibility (PS) -27815 + (NN) -9882 + (LL) -144
1D Compatibility (HY) -25600 + (ID) 6650
Total energy: -214547.0 ( -97.92 by residue)
QMean score : 0.587

(partial model without unconserved sides chains):
PDB file : Tito_1VP5.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1VP5-query.scw
PDB file : Tito_Scwrl_1VP5.pdb: