Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MTFWQDMMNFFSYDNLMYWLSEYRNLGPLLAFLLPFIEAFLPFLPFIVFVVVNVNAYGLLIGFLISVIAAIAGSLCVFLLARKFGQTRFLRFISGHKQIKRVMEWIDRHGFSPIFILLVMPFTPSSAVNIVAGLSKIKVYQFILALVGGKLIKVFAISYIGYDFVDLIHQ--------PLKLAILAVSVVIL-WFVGKRLEHWMSGKNLK- |
4PAW Chain:A ((22-218)) | HMDIKACYQNAKALLEGHFLLSSGFHSNYYLQSAKVLEDPKLAEQLALELAKQIQEAHLNIECVCSP--AIGGILAGYELARALGV----RFIFTERV-DNTMALRRGFEVKKNEKILVCEDIITTGKSAMECAKVLEE-------KGAQIVAFGALANRGICKRAHSHLKAQEGACLPSHLPLFALEDFVFDMHKPSSCPLCATSVAIKP |
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General information:
TITO was launched using:
| RESULT:
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Template: 4PAW.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -243362 for 1501 contacts (-162.1/contact) +
2D Compatibility (PS) -18682 + (NN) 3362 + (LL) 2056
1D Compatibility (HY) 0 + (ID) 1350
Total energy: -257976.0 ( -171.87 by residue)
QMean score : 0.241
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