Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | ----------------------------------------------------------------MLEKNYKFLLWIYIFWFLGSVLLVSLHIIPPELTAVQSLFLVFTGVFAAVFFIMQYGKWLGS---------------AITLLIFVVSTCIEWMQLSYTDEYIGSTLGGSVYGIPITMGFIWVGMVAGTHIIAREITLKINIDWIRGGIYSFIAATMVMIF----EVLIEPITMQSKQLYITQNGFTILQLSDFINWWLLGLILHLMIYFILSLTDSWERLKYPDLKSEI--VIVYWIIIAFFVFLSFYLDLWTSIAIIIVSNIIFTACYFFSLEKETQTKKKSE--------------- |
| 3B9W Chain:A ((8-369)) | INEARLVAQYNYSINILAMLLVGFGFLMVFVRRYGFSATTGTYLVVATGLPLYILLRANGIFGHALTPHSVDAVIYAEFAVATGLIAMGAVLGRLRVFQYALLALFIVPVYLLNEWLVLDNASGLTEGFQDSAGSIAIHAFGAYFGLGVSIALTTAAQRAQPIESDATSDRFSMLGSMV-LWLFWPSFATAIVPFEQMPQTIVNTLLALCGATLATYFLSALFHKGKASIVDMANAALAGGVAIGSVCNIVGPVGAFVIGLLGGAISVVGFVFIQPMLESKAKTIDTCGVHNLHGLPGLLGGFSAILIVPGIAVAQLTGIGITLALALIGGVIAGALIKLTGTTKQAYEDSHEFIHLAGPEDE |
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General information:
TITO was launched using:
| RESULT:
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Template: 3B9W.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -270275 for 2136 contacts (-126.5/contact) +
2D Compatibility (PS) -26044 + (NN) -2410 + (LL) 52
1D Compatibility (HY) 1200 + (ID) 1350
Total energy: -298827.0 ( -139.90 by residue)
QMean score : 0.164
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