Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | LVIYLLAGFFLLLFIVLSFIDRRRISNGIILTMALFFSVLSVVYATFSKGNELLVSVMGTVLLLLVLLIPFFVVGIATMLIVNGRLMLKREGRKLANMLPLIIGLGILALIITWFGSILKTGSPILGIVVVFIVALVGYFSFLFLSFLLSTFLYQFNFPRYNQDFLIVLGSGLIGGDRVPPLLASRLNRAIKFYDKQYAKKGKRATFIVSGGQGANE------T--ISEAEAMRGYLIEQGIDENFIIMEDQSVNTLQNMKFSKAKMDAIMSNYNSLFSTNNFHLFRAGIYARKAGLKSQGIGAKTALYYMPNALIREFIAITVMYKKVHMVLLGLLLLFFAFLAIIGVTFR |
| 2K1S Chain:A ((44-113)) | ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TLKPAGANTLTGVAMVLKEYP-----KTAVNVIGYTDSTGGHDLNMRLSQQRADSVASALITQGVDASRIRTQGL---------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2K1S.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -31890 for 349 contacts (-91.4/contact) +
2D Compatibility (PS) -6642 + (NN) -5184 + (LL) 25788
1D Compatibility (HY) -400 + (ID) 600
Total energy: -18928.0 ( -54.23 by residue)
QMean score : 0.540
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