Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTETRTEKKKKTTSTFTKVMKIASVALLGIIFFSITGLAAKYYITVQNTFSKINVPLESSNKTLSDLEKKKPFSVLLMGSDARAGE----KNGRADTIILATANKQQNAVEMVSIPRDTKVDYGNGD-------IGKINASYSNGGPSGTVSAVEKLMPGVPVDYFISINMEGFKDLVDAVGGITVYNDIDLTEV--------NSKFVKGNITLNGTEALQYVRIRHEDPRGDFGRQDRQRDVIIGIANKVISSSGVSNFESIMKAVGDNFQTNMTLTD--ITSMAANYSSVLKNVDSQELKGEGEMIYSESYGFDLYYFAPDKTDLERIITMFKKSLDITE |
| 3OKZ Chain:A ((51-321)) | ---------------------------------------------------------------SHAIEETKPFSILLMGVDTGSEHRKSKWSGNSDSMILVTINPKTNKTTMTSLERDVLIKLSGPKNNGQTGVEAKLNAAYASGGAEMALMTVQDLLD-INVDYFMQINMQGLVDLVNAVGGITVTNKFDFPISIAANEPEYKAVVEPGTHKINGEQALVYSRMRYDDPEGDYGRQKRQREVIQKVLKKILALNSISSYKKILSAVSNNMQTNIEISSKTIPNLLAYK-DSLEHIKSYQLKGEDATLS--D---GGSYQILTKKHLLAVQNRIKKELDKK- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3OKZ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 34831 for 1702 contacts (20.5/contact) +
2D Compatibility (PS) -24335 + (NN) 8056 + (LL) 5324
1D Compatibility (HY) 8800 + (ID) 850
Total energy: 31826.0 ( 18.70 by residue)
QMean score : -0.022
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