Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSKIVFFDVDGTLVGETKEIPASAKQAIAKLKENGVYVAIATGRGPFMLDEIRKELDINSY-ICYNGQYVI-FEGKEIYAKPLPTESLERLITVASEHEHPIVFSG---KDSMRANL--PDHDRVTIGMNSIKREYPKVDANYYKGRDIYQCLLFCDESYDAYYREEFKQYGFLRWHD---------VSVDVCPADGSKAEGIKQMIKKLGFSMKDTYAFGDGLNDIAMLQTVGTGVAMGNGRDEVKAVAD--YVTSHVDDDGVYNALKQLKLI |
| 3PGV Chain:A ((22-284)) | --QVVASDLDGTLLSPDHFLTPYAKETLKLLTARGINFVFATGRHYIDVGQIRDNLGIRSYMITSNGARVHDSDGQQIFAHNLDRDIAADLFEIVRND--PKIVTNVYREDEWYMNRHR-----F---FKEAVFNYKLYEPGELDPQGISKVFFTCE---DHEHLLPLEQAMNARWGDRVNVSFSTLTCLEVMAGGVSKGHALEAVAKMLGYTLSDCIAFGDGMNDAEMLSMAGKGCIMANAHQRLKDLHPELEVIGSNADDAVPRYLRKLYL- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3PGV.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -112188 for 1889 contacts (-59.4/contact) +
2D Compatibility (PS) -26960 + (NN) -16717 + (LL) 636
1D Compatibility (HY) -13600 + (ID) 3400
Total energy: -172229.0 ( -91.17 by residue)
QMean score : 0.534
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