Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MINQVYRLVSERQFEEANIEEALTEDVVVVRPTYLSICAADQRYYTGSRGKEMLSKKLPMALIHEGVGQVTYDATGEFEIGTKVVMIPNTPT---------EDDPVIAEN--YRRSSLFRSSGYDGLMQENVFMRRDRVVRLPENMDMEVAAYSELISVAFHAITRFKQKANANQSVFG-------VWGDGNLGFITCLLLK-------TIY-------PESKVIIFGKTQYKLDFFSFVDEAHL-VDEIPEGL-VIDNAFECAGGKGSQYAVEQIIDLIKPEGTISLLGVSE------NPIEFNSRMVLEKGLTVFGSSRSGKEDFQ-NTVNFLSENERAVEYLSSLIGQRKVVRNLQDIIEAFETDLRNPFGKTVMEWKV |
| 2B5W Chain:A ((28-316)) | ---------------------------ALVRTLRVGVCGTDHEVIAGGHGG-FPEGEDHLVLGHEAVGVVVDPNDTELEEGDIVVPTVRRPPASGTNEYFERDQPDMAPDGMYFERGIVGAHGY---MSEFFTSPEKYLVRIPRSQ-AELGFLIEPISITEKAL----EHAYASRSAFDWDPSSAFVLGNGSLGLLTLAMLKVDDKGYENLYCLGRRDRPDPTIDII----EELD-ATYVDSRQTPVEDVPDVYEQMDFIYEATGFP--KHAI-QSVQALAPNGVGALLGVPSDWAFEVDAGAFHREMVLHNKALV-GSVNSHVEHFEAATVTF------------------------------------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 2B5W.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -97324 for 1945 contacts (-50.0/contact) +
2D Compatibility (PS) -26797 + (NN) -2375 + (LL) 7504
1D Compatibility (HY) -14400 + (ID) 3950
Total energy: -137342.0 ( -70.61 by residue)
QMean score : 0.320
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