Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MEIRERILADMQVAETIDAHEEIRKSVEFLKAYLKKNTFLKSFVLGISGGQDSTLTGKLAQMAISEMRAETGDDEYRFFAVSLPYGTQLDESDRQDALNFMEPDNRLTVNIKASVD----ASVAALAEAGVELSD-----FAKGNEKARERMKVQYAIAAMHKGVVVGTDHSAEAVTGFYTKYGDGGTDINPLFRLNKRQGKALLKELGCPEHLYLKKPTADLEDNKPALPDEVALGVTYDQIDDYLEGKEVPADAAAKIENWFIKTEHKRHMAITIFDDFWK |
| 3Q4G Chain:A ((7-279)) | -----KIREEMRVLPSIDPQFEIERRVAFIKRKLTEARY-KSLVLGISGGVDSTTCGRLAQLAVEELNQQHNTTEYQFIAVRLPYGEQKDEDEAQLALSFIRPTHSVSVNIKAGVDGLHAASHHALANTGLIPSDPAKVDFIKGNVKARARMVAQYEIAGYVGGLVLGTDHSAENITGFYTKFGDGACDLAPLFGLNKRQVRLLAKTLGAPEQLVYKTPTAD-------------LNLTYEQIDDFLEGKAVPAEVSQRLVAIYHATQHKRQPIPTIYD---- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3Q4G.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -44193 for 1948 contacts (-22.7/contact) +
2D Compatibility (PS) -27938 + (NN) -16999 + (LL) 1764
1D Compatibility (HY) -21600 + (ID) 6700
Total energy: -115666.0 ( -59.38 by residue)
QMean score : 0.523
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