Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MIKLGNDWDELLKNEFNQPYYLTLRQFLKKEYQTK-KVFPDMYDIFNALKHTAYKDVKVVILGQDPYHGPGQAHGLSFSVQQGVQIPPSLQNIYLELHNDL-NCEIPNNGYLIPWADQGVLLLNTVLTVRAGQANSHRGQGWEILTNHIIEIINQKEEPVVFLLWGSNAKEKLQLLTNPKHTAFTSVHPSPLSASRGFMGCKHFSKTNQFLEQNGVKPIDWQIPSI
1FLZ Chain:A ((6-219))
-------WHDVLAEEKQQPHFLNTLQTVASERQSGVTIYPPQKDVFNAFRFTELGDVKVVILGQDPYHGPGQAHGLAFSVRPGIAIPPSLLNMYKELENTIPGFTRPNHGYLESWARQGVLLLNTVLTVRAGQAHSHASLGWETFTDKVISLINQHREGVVFLLWGSHAQKKGAIIDKQRHHVLKAPHPSPLSAHRGFFGCNHFVLANQWLEQHGETPIDW-----
General information:
TITO was launched using:
RESULT:
Template:
1FLZ.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -120014 for 1748 contacts (-68.7/contact) +
2D Compatibility (PS) -22413 + (NN) -5157 + (LL) 684
1D Compatibility (HY) -19600 + (ID) 6000
Total energy: -172500.0 ( -98.68 by residue)
QMean score : 0.516
(partial model without unconserved sides chains):
PDB file :
Tito_1FLZ.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1FLZ-query.scw
PDB file :
Tito_Scwrl_1FLZ.pdb
: