Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MATNKKEIIRLLEEIATYMELKGENSFKISAFRKAAQAIELDSRSLSEIDDFTKISGIGKTTGEIIQRYLDSGECPELEELKKEVPAGLVPLLD-VPGLGGKKLSRLYHELGVVDKDTLLQEAENGHIE--ALKGFGKKSAEKMAEAVREMGERPDRYPLNDVLPIIQKVEA-YLAEIAPIETFAQAGSLRRLRETVKDLDYVI--------ATEKPE---DVQKALLAFPLITDVIGAGETKVSAVLE------DNITISVDFRLVEKKAFATTLHHFTGSKDHNIKMRQLAKQSNEKISEY-----GVEQEDGTVRHFESEKTFFEHFKIPFLPPEVRRDGTEIERVTKDTKFLELSDIRGDLHMHTTWSDGAYAIPEMIEACIAKGYEYMVITDHGKFLRVANGLDEKRLLEQQAEIKKIAAKYPEIDVYSGVEMDILADGSLDFDDETLKQLDFVIASIHSSFQQSEEEIMKRLKTACENPYVRLIAHPTGRIVVKRKPYHVNMKELIQLAKSTGTALELNANPQRLDLNREHLEMAHAAGVPIAINTDAHDTKHLDFMSIGVRAATKAWLGKSAILNTKTAAEFKQFLQNK |
| 4M2Y Chain:A ((5-323)) | -------ITDMLTELANFEKNVSQAIHKYNAYRKAASVIAKYPHKIKSGAEAKKLPGVGTKIAEKIDEFLATGKLRKLEKIRQDDTSSSINFLTRVSGIGPSAARKFVDEGIKTLEDLRKNEDKLNHHQRIGLKYFGDFEKRIPREEMLQMQDI--------VLNEVKKVDSEYIATV--------CGSFRRGAESSGDMDVLLTHPSFTSES----KLLHQVVEQLQKVHFITDTLSKGETKFMGVCQLPSDEKEYPHRRIDIRLIPKDQYYCGVLYFTGSDIFNKNMRAHALEKGFTINEYTIRPLGVTGVAGEPLPVDSEKDIFDYIQWKYREPKDR---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4M2Y.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -108155 for 2019 contacts (-53.6/contact) +
2D Compatibility (PS) -30764 + (NN) -9735 + (LL) 20860
1D Compatibility (HY) -14400 + (ID) 4050
Total energy: -146244.0 ( -72.43 by residue)
QMean score : 0.461
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