Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MNGIIPLWKERGMTSHDCVYKLRKILHTKKVGHTGTLDPEVEGVLPICIGRATKLAEYVTDEGKVYVAEITLGKSTTTEDATGETVNTKELAEISAAELQAALTKLTGKITQIPPMFSAVKVNGKKLYEYARAGIEVERPSRQVDIYSLIRLDGDTALNQSNPTFQLEIACGKGTYIRTLAVMIGELLGYPAHMSKLERTRSGFFKKEDCL-TLTEI--------DEMMQASDSSFLYPLEKGIESMAKLVIEEEVYAKVLNGGLLPTSLFAEVE-----NEPRAALIFKDKLTAIYKPHPEKKDLWKPEKVIELNQA |
| 3LWR Chain:A ((47-301)) | --GVINLDKPPGPTSHEVVAWIKKILNLEKAGHGGTLDPKVSGVLPVALEKATRVVQALLPAGKEYVALMHLH------------------GDVPEDKIIQVMKEFEGEIIQR----------LR---------------TRKVYYIEVLEIEGRDVL--------FRVGVEAGTYIRSLIHHIGLALGVGAHMSELRRTRSGPFKEDETLITLHDLVDYYYFWKEDGIEEYFRKAIQPMEKAVEHLPKVWIKDSAVAAVTHGADLAVPGIAKLHAGIKRGDLVAIMTLKDELVALGK-------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3LWR.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -163120 for 1761 contacts (-92.6/contact) +
2D Compatibility (PS) -24192 + (NN) -2038 + (LL) 4188
1D Compatibility (HY) -16800 + (ID) 4100
Total energy: -206062.0 ( -117.01 by residue)
QMean score : 0.505
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