Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKKSNTFLLITILVGLVFISFGCSEEKETPKKTAKEVQGVQIKTKEFQRVVGWLSKD-SVLLQTKKSG------VTYFEELNIYNEKKRPIFNTK---ESISEVQISPDYRNILLYSAESAEKATMRIIALNDGSTVASRATK-------------------PLTTTFYWNDESPEKIMFVTYSPE-----------------------------WNFQIENWDYTLDQLDKID----------VASPFISWYGDNLVISNNKDKPDDELGNLYLQDIRDSATKNLIVA---------NIMQFAVHDNV-LLTIEK---NSDEKLLYDFRTLGFQN----FFSYNAAREYDELGTFVPYF-DTNFDKNTFLTFVPYKSAKIGSGAKEYKLVKIDPTNKKESTILEL-M----DNQPILSYETGDLVLYGYLFDKVIDTKTGKMYNLINTPTKSF |
| 1XFD Chain:A ((61-429)) | ---------------------------------------------LRAIRYEISPDREYALFSYNVEPIYQHSYTGYYVLSKIPHGDPQSLDPPEVSNAKLQYAGWGPKGQQLIFIF-----ENNIYYCAHVGKQAIRVVSTGKEGVIYNGLSDWLYEEEILKTHIAHWWSPDGTRLAYAAINDSRVPIMELPTYTGSIYPTVKPYHYPKAGSENPSISLHVIGLNGPTHDLEMMPPDDPRMREYYITMVKWATSTKVAVTWLNRA-QNVSILTLCDATTGVC-TKKHEDESEAWLHRQNEEPVFSKDGRKFFFIRAIPQGGRGKFYHITVSSSQPNSSNDNIQSITSG----DWDVTKILAYDEKGNKIYFLSTEDL------PRRRQLYSANTVGNFNRQCLSCDLVENCTYFSASFSHSMDFFLLKCE----------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1XFD.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -60778 for 1989 contacts (-30.6/contact) +
2D Compatibility (PS) -29802 + (NN) -2683 + (LL) 5644
1D Compatibility (HY) -1600 + (ID) 1050
Total energy: -90269.0 ( -45.38 by residue)
QMean score : 0.251
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