Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MFKKKIDWRDERGFTLVEMLIVLLVVSVLLLLTIPNIVSQSKSINDKGCEAFISMVQGQVQSYQLDKNSIPSVADLVSGGYLKANQKSCPNGNSIKIDSSGNVSEKK
3J27 Chain:B ((38-50))
---------RHPGFTIMAAILA-------------------------------------------------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
3J27.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -1061 for 47 contacts (-22.6/contact) +
2D Compatibility (PS) -1235 + (NN) 188 + (LL) 5508
1D Compatibility (HY) -1200 + (ID) 150
Total energy: 2050.0 ( 43.62 by residue)
QMean score : 0.484
(partial model without unconserved sides chains):
PDB file :
Tito_3J27.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3J27-query.scw
PDB file :
Tito_Scwrl_3J27.pdb
: