Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | LSKQNVPSYGGQAVVEGVMFGGRKQTVTAIRRIDGSLEYFYLEKNSPVWVMRMKKIPFLRGIVALIESSAIGSKHLAFATDRYDEDPNNPVEEEKIEKKESKVAMWLGVAVIGILSFVFAKFVMTLIPVFLAELFRPIVPGDTAQVFLESLFKLILLLTYIFAVSQTPIIKRVFQYHGSEHKVINCYEENLPLTVENVQKQSRLHYRCGSSFILFTVIVGMFIYLLVPTDPLWLRVVDRILLIPVVLGVAFEVLQLTNKCRNIPVLKYLGVPGLWLQLLTTKEPSDDQVEVAIASFNELLRVEKEGAPIDVVEPDNLELLE |
1F2L Chain:A ((5-42)) | ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------VTKCNITCSKMTSKIPVALLIHYQQNQASCGKRAIILE--------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1F2L.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -7967 for 165 contacts (-48.3/contact) +
2D Compatibility (PS) -3692 + (NN) 558 + (LL) 23868
1D Compatibility (HY) -1200 + (ID) 300
Total energy: 11267.0 ( 68.28 by residue)
QMean score : 0.331
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