Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MGLTATEALMKMKEKGYKHTDKREFLINLLARKN-KYLTAKDVLENMKDDFPGISFDTIYRNLSLFVELGIFEETDLSGERN-FRLACTHEHHHHHFICMKCGKTKEIMMCPMDFLTEALPG---YQIDGHKFEVYGECPECLQAS
2W57 Chain:A ((8-133))
-----------LKDAGLKVTLPRLKILEVLQQPECQHISAEELYKKLIDLGEEIGLATVYRVLNQFDDAGIVTRHHFEGGKSVFELST--QHHHDHLVCLDCGEVIEFSDDVIEQRQKEIAAKYNVQLTNHSLYLYGKC-------
General information:
TITO was launched using:
RESULT:
Template:
2W57.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -53952 for 750 contacts (-71.9/contact) +
2D Compatibility (PS) -12666 + (NN) 845 + (LL) 1684
1D Compatibility (HY) -9200 + (ID) 1600
Total energy: -74889.0 ( -99.85 by residue)
QMean score : 0.527
(partial model without unconserved sides chains):
PDB file :
Tito_2W57.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2W57-query.scw
PDB file :
Tito_Scwrl_2W57.pdb
: