Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSEPFKSGFVAIVGRPNVGKSTLLNHIIGQKIAIMSDKAQTTRNKVQGVYTTDESQIIFIDTPGIHKPKHKLGD--FMVKI---ALNTFQEVDLIYFVIDASTGFGRGDEFIIEKLKNVQTPVFLLINKIDLIAPEDLFKLIEQYRDLMDFDEIIPISALQGNNVPNLLEQTNANLEIGPMYYPKDQITDHPERFIISELIREQVLQLTREEVPHSVAVVIEGIEKNPKTEKLTINATIIVERSTQKGIIIGKQGQMLKQIGMRARKEIERLLGSKVFLEIWVKVQKNWRDKEHYLQDYGFDREEY |
| 4KYU Chain:A ((6-157)) | ---------VAIVGRPNVGKSTIFNRIAGERI----------RDRIYSSAEWLNYDFNLIDTGGI-----DIGDEPFLAQIRQQAEIAMDEADVIIFMVNGREGVTAADEEVAKILYRTKKPVVLAVNKLD--NTEMRANIYDFYS--LGFGEPYPISGTHGLGLGDLLD---------------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4KYU.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -100891 for 1077 contacts (-93.7/contact) +
2D Compatibility (PS) -14428 + (NN) -5789 + (LL) 12892
1D Compatibility (HY) -10800 + (ID) 2550
Total energy: -121566.0 ( -112.87 by residue)
QMean score : 0.542
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