Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MTVLEIDLLDETKNLLDEDKQLVENILQ-FAAEYLKIEQGTELSLTFTTNEGIREINREYRDKDQATDVISFALEEMGDGETEIDWGEFDLETPRMLGDIIISTEKAEEQAKDYGHTKARELGFLAVHGLLHLLGYDHMEPDEEKVMFGLQKEVLDAYGLER |
2GAI Chain:A ((351-442)) | ------------KYLNSDQKKLYELIWKRFLASQMKPSQYEETRFVLRTKDG------KYRFKGTVLKKIFDGYEKVW--KTERNTGEFPFEEGESVKPVVVKIEEQETKPK-------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2GAI.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 5121 for 403 contacts (12.7/contact) +
2D Compatibility (PS) -9465 + (NN) 622 + (LL) 5112
1D Compatibility (HY) -4000 + (ID) 1350
Total energy: -3960.0 ( -9.83 by residue)
QMean score : 0.213
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