Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKITTKGRYGLTITLELAKRIGDGPISLRSIAQDKNLSEHYLEQLIGPLRNAGIVKSIRGAHGGYVLNGDPEKITAGDIIRTLEGPIVLVESMEDEEAAQRELWTRMRNAVRDVLDQTTLADLLKHSTDSELTDGYMFYI
2Y75 Chain:F ((2-128))
LKISTKGRYGLTIMIELAKKHGEGPTSLKSIAQTNNLSEHYLEQLVSPLRNAGLVKSIRGAYGGYVLGSEPDAITAGDIIRVLEGPISPVEVLEDEEPAKRELWIRIRDAVKEVLDSTTLEDLASYT-------------
General information:
TITO was launched using:
RESULT:
Template:
2Y75.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -68539 for 860 contacts (-79.7/contact) +
2D Compatibility (PS) -13740 + (NN) -6243 + (LL) 760
1D Compatibility (HY) -12400 + (ID) 4450
Total energy: -104612.0 ( -121.64 by residue)
QMean score : 0.626
(partial model without unconserved sides chains):
PDB file :
Tito_2Y75.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2Y75-query.scw
PDB file :
Tito_Scwrl_2Y75.pdb
: