Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMPEMPEVENVRATLQELVPGKKIDQVIVRVPKMIVSTPPDE--FVHMLVGQEIEGVRRRGKFLLFDLTNCTILSHLRMEGKFRLMDENEEVSKHTHIIFHFEDHTELRFLDVRKFGTMEVTNKYGEGETRSIKKLGPEPLTQAFTLTDFATGVKKTSRAIKTALLDQKLVAGVGNIYADEICFEAKVRPERAANSLSDKEIKRIFKATKSIMTEAVALGGSTVRTYVNSQGKLGQYQNKLKVYGKTDEPCVVCGTPIEKIKLNGRGTHFCPNCQK
3JR4 Chain:A ((1-273))-PQLPEVETIRRTLLPLIVGKTIEDVRIFWPN-IIRHPRDSEAFAARMIGQTVRGLERRGKFLKFLLDRDALISHLRMEGRYAVASALEPLEPHTHVVFCFTDGSELRYRDVRKFGTMHVYAKEEADRRPPLAELGPEPLSPAFSPAVLAERAVKTKRSVKALLLDQTVVAGFGCIYVDESLFRAGILPGRPAASLSSKEIERLHEEMVATIGEAVMKGGST----------AGTFQHHLYVYGRQGNPCKRCGTPIEKTVVAGRGTHYCPRCQR


General information:
TITO was launched using:
RESULT:

Template: 3JR4.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -97795 for 2137 contacts (-45.8/contact) +
2D Compatibility (PS) -27858 + (NN) -11163 + (LL) 948
1D Compatibility (HY) -20800 + (ID) 6200
Total energy: -162868.0 ( -76.21 by residue)
QMean score : 0.442

(partial model without unconserved sides chains):
PDB file : Tito_3JR4.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3JR4-query.scw
PDB file : Tito_Scwrl_3JR4.pdb: