Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTKTLTNKLAEKEHAAVVTYIMGG----DGGLDNLEEQLLFLEKSGVSAIEIGIPFSDPVADGPIIQLAGLRALKEQVSLEAILN--KLAMSKVQIPLIIMSYINPIFHLGIPKFVELVQKTPVKGLIIPDLPYEHQKLITPELQGTDIALIPLVSLTSPKERLEEIAKQAEGFIYAVTVNGTTGVRSEFDAHIDSHLAYLKSISPVPVLAGFGVSSIEHVEKFAHVCDGVIIGSKVVQMLHEEKTAELGAFLQKAAEVRIKN
1WXJ Chain:A ((15-241))
-------------RAALIPYLTAGFPSREGFLQAVEEVLPYAD-----LLEIGLPYS-----GPVIQRASELALRKGMSVQGALELVREVRALTEKPLFLMTYLNPVLAWGPERFFGLFKQAGATGVILPDLPPDEDPGLVRLAQEIGLETVFLLAPTSTDARIATVVRHATGFVYAVS-------------EVKDLVRRIKARTALPVAVGFGVSG-KATAAQAAVADGVVVGSALVRALEEGRS-----------------
General information:
TITO was launched using:
RESULT:
Template:
1WXJ.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -202498 for 1654 contacts (-122.4/contact) +
2D Compatibility (PS) -22208 + (NN) -11904 + (LL) 3656
1D Compatibility (HY) -14400 + (ID) 3350
Total energy: -250704.0 ( -151.57 by residue)
QMean score : 0.625
(partial model without unconserved sides chains):
PDB file :
Tito_1WXJ.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1WXJ-query.scw
PDB file :
Tito_Scwrl_1WXJ.pdb
: