Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
LSNISKETVEKVANLAKLEVSETEATAFAGQLGKIIELVEQLNTLDTTNVEPTSHAIDVSNVLREDVATKGLDRKEVLKNAPDEQDGMFKVPTIMEQ
3POC Chain:A ((586-659))
--SISEEVLEKGVHYVDVALNEVPLFIRSGKCIPVAEAAECVKDIDTENMQLIGYEGSSYTLYEDDGIHKDYDKKE---------------------
General information:
TITO was launched using:
RESULT:
Template:
3POC.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 7918 for 298 contacts (26.6/contact) +
2D Compatibility (PS) -7475 + (NN) 4304 + (LL) 1548
1D Compatibility (HY) -2000 + (ID) 850
Total energy: 3445.0 ( 11.56 by residue)
QMean score : 0.175
(partial model without unconserved sides chains):
PDB file :
Tito_3POC.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3POC-query.scw
PDB file :
Tito_Scwrl_3POC.pdb
: