Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MPAVIGVIMGSTSDWDTMKKACDVLDELEIAYEKKVVSAHRTPDLMFQYAEQARERGLKIIIAGAGGAAHLPGMVAAKTTLPVIGVPIKSKALNGMDSLLSIVQMPGGVPVATVAIGESGAVNAGLLAAQILSITDDAITNRLQKRRATLEETVLESSDYLG
2FWI Chain:A ((24-177))
---VVGIIMGSQSDWETMRHADALLTELEIPHETLIVSADRTPDRLADYARTAAERGLNVIIAGAGGAAHLPGMCAAWTRLPVLGVPVESRALKGMDSLLSIVQMPGGVPVGTLAIGASGAKNAALLAASILALYNPALAARLETWRALQTASVPNS-----
General information:
TITO was launched using:
RESULT:
Template:
2FWI.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -125532 for 1293 contacts (-97.1/contact) +
2D Compatibility (PS) -16689 + (NN) -4874 + (LL) 204
1D Compatibility (HY) -15600 + (ID) 4850
Total energy: -167341.0 ( -129.42 by residue)
QMean score : 0.622
(partial model without unconserved sides chains):
PDB file :
Tito_2FWI.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2FWI-query.scw
PDB file :
Tito_Scwrl_2FWI.pdb
: