Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTLQGKVAVVTGGSRGIGRDIAINLAKEGANIFFNYNGSPEAAEETAKLVAEHGVEVEAMKANVAIAEDVDAFFKQAIERFGRVDILVNNAGITRDNLLMRMKEDEWDDVININLKGTFLCTKAVSRTMMKQRAGKIINMASVVGLIGNAGQANYVASKAGVIGLTKTTARELAPRGINVNAVAPGFITTDMTDKLDEKTKEAMLAQIPLGAYGTTEDIANAVLFLASDASKYITGQTLSVDGGMVM
3TZC Chain:A ((8-249))
MNLEGKVALVTGASRGIGKAIAELLAERGAKVIGTAT-SESGAQAISDYLGDNG---KGMALNVTNPESIEAVLKAITDEFGGVDILVNNAGITR----MRMKEEEWSDIMETNLTSIFRLSKAVLRGMMKKRQGRIINVGSVV------------AAKAGVIGFTKSMAREVASRGVTVNTVAPGFIETDM-----DEQRTATLAQVPAGRLGDPREIASAVAFLASPEAAYITGETLHVNGGMY-
General information:
TITO was launched using:
RESULT:
Template:
3TZC.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -111457 for 1860 contacts (-59.9/contact) +
2D Compatibility (PS) -23452 + (NN) -3162 + (LL) 1256
1D Compatibility (HY) -20800 + (ID) 6000
Total energy: -163615.0 ( -87.97 by residue)
QMean score : 0.561
(partial model without unconserved sides chains):
PDB file :
Tito_3TZC.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3TZC-query.scw
PDB file :
Tito_Scwrl_3TZC.pdb
: