Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSVHIEAKQGEIAETILLPGDPLRAKYIAETFLEDVVLFNQVRGMLGFTGTYKGEKVSVMGTGMGIPSISIYVNELIQSYDVKNLIRVGTMGGIQADVKVRDVVIAQAASTDSQINRNTFAGVDFAPVADFSLLKKAYDAGIEKGLSLKVGNVFSADRFYNDQLDKQQLADYGVLGIEMEAAALYTLAQKYGRRALAILTVSDHIFTGEETSAEERQTTFNDMIVVALEAAIK
4DAE Chain:A ((21-250))
MSVHIGAEKGQIADTVLLPGDPLRAKFIAETYLENVECYNEVRGMYGFTGTYKGKKISVQGTGMGVPSISIYVNELIQSYDVQNLIRVGSCGAIRKDVKVRDVILAMTSSTDSQMNRVAFGSVDFAPCADFELLKNAYDAAKDKGVPVTVGSVFTADQFYNDDSQIEKLAKYGVLGVEMETTALYTLAAKHGRKALSILTVSDHVLTGEETTAEERQTTFHDMIDVALHS---
General information:
TITO was launched using:
RESULT:
Template:
4DAE.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -167977 for 2008 contacts (-83.7/contact) +
2D Compatibility (PS) -24456 + (NN) -6187 + (LL) 412
1D Compatibility (HY) -28800 + (ID) 8100
Total energy: -235108.0 ( -117.09 by residue)
QMean score : 0.560
(partial model without unconserved sides chains):
PDB file :
Tito_4DAE.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4DAE-query.scw
PDB file :
Tito_Scwrl_4DAE.pdb
: