Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MPTPSMEDYIEKIYSLIETKGYARVSDIADELFVHPSSVTKMVQKLDKDEYLIYEKYRGLILTPKGTQMGKRLLERHALLESFLSIIGVDPSHIYHDVEGIEHHLSWNSIDRIGDVVQFFENHPDALKTLKAMETTKPETKE
4HX8 Chain:A ((5-134))
----SMEDYIKQIYMLIEEKGYARVSDIAEALAVHPSSVTKMVQKLDKDEYLIYEKYRGLVLTSKGKKIGKRLVYRHELLEQFLRIIGVDEEKIYNDVEGIEHHLSWNSIDRIGDLVQYFEEDDARKKDLKSIQ--------
General information:
TITO was launched using:
RESULT:
Template:
4HX8.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -77732 for 868 contacts (-89.6/contact) +
2D Compatibility (PS) -13432 + (NN) 1092 + (LL) 332
1D Compatibility (HY) -18400 + (ID) 4850
Total energy: -112990.0 ( -130.17 by residue)
QMean score : 0.574
(partial model without unconserved sides chains):
PDB file :
Tito_4HX8.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4HX8-query.scw
PDB file :
Tito_Scwrl_4HX8.pdb
: