Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MNGKQVMVGGLSLLLVGAGLGAFGSTAQAATDDASVMPDISNKQVLVGYWHSWKSSGKDGYQQGTSADIALKDTPKAYNVVDVSFMKGDGVNRIPTFKP-----VGINDSDFRAQVGALNKEGRAVLLALGGADGHVELKAGDEEA-FANEIIRQVETYGFDGLDIDLEQSAITAGDNKTVIPAALKIVKDHYKAEGKNFLITMAPEFPYLKPGSAYESYLTSLANYYDYIA---PQLYNQGGDGVWVDETNQWIAQNNDTLKESFLYYMADSFINGTRGYLKIPANKFVFGLPANVDAAATGYVTDPQIVK---NVFTRLQAKGT--------PVKGIMTWSVNWDAGKNKAGVPYNNSFSNAYGPIVGTK |
| 3EBV Chain:A ((2-286)) | ----------------------------------------SLKHAVTGYWQN--------FNNGATVQ-KISDVPSAYDIIAVAFADATTTPGAVTFNLDSAGLGGYTVDQFKADVRAKQAAGKKVIISVGGEKGTVSVNSSASATNFANSVYSVMREYGFDGVDIDLEN-----GLNPTYMTQALRALS---AKAGPDMILTMAPQ--TIDMQSTQGGYFQTALNVKDILTVVNMQYYNSG---TMLGCDGKVYAQGT----VDFLTALACIQLEG-----GLAPSQVGLGLPASTRAAGGGYVS-PSVVNAALDCLTKATNCGSFKPSKTYPDLRGAMTWSTNWDA---TAGNAWSNS------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 3EBV.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -96678 for 2231 contacts (-43.3/contact) +
2D Compatibility (PS) -28510 + (NN) -12052 + (LL) 2792
1D Compatibility (HY) -18400 + (ID) 4400
Total energy: -157248.0 ( -70.48 by residue)
QMean score : 0.529
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