Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MYLCENENAYRRRNSGNLEIEMSEITLRNRKPKRKIGKWIAIILGIIIVLVVAAFLYFRYAEKPVTNAETEALDRISGQVDLKTTDQFYLYNGPKEVYYVLTGKNSKNKNIIVWVPKKKSDKVYVKFASDGITEQQARDKVTKEKKP-------KKILHVNLGMEK-----ETPIWEVAYLD---KNDKLNYFDINFETGEWYREIENL |
| 3NQZ Chain:A ((98-178)) | -------------------------------------------------------------------------------------------------------------------------------VSAKLTKKDAILKGSKTGIAAKSVGLKKHNEQSRLAIWVDDQNKAHLVYEVSYVTYGKSPSRPYL-IIDANTGEVLLSYDNL |
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General information:
TITO was launched using:
| RESULT:
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Template: 3NQZ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 3187 for 453 contacts (7.0/contact) +
2D Compatibility (PS) -6866 + (NN) 349 + (LL) 10012
1D Compatibility (HY) -3200 + (ID) 800
Total energy: 2682.0 ( 5.92 by residue)
QMean score : 0.359
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