Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMKIWNSIVGKIWSTIILLLIGILVISGFLVAMIYEKNNITRITNELEDKTASIITVMQENNEVISAENNNDSALILLDDTMGVIIEQNGKSVYQSQSPDTISSASANKLIQDKTLDKALEKDNSVTMKYNFKTEKSSLPVEISAQKFKLANGETGVVYVYQSYHDILKVNEKTMSTLIISGIIAIVITSILSFVFSSRMAFPLREMKKIAIAVSKGNFDNRVPTYTHDEIGELGVAFNDMAKQLKYNVSALRQEKEQLSNILVGMADGVIKFSVDKTIILSNPPAEEFLHNWFFSPENTEKVLIPVALNELLNDTLEKKESQVGEITFADHTYVAILTLLYTGEHVRSIVAVIRDMTEEKQLEKMKSDFVNNVSHELRTPISMLQGYSEAIIDGVAQSDEEVREFAQIIYDESLRIGRLVNDMLDLARMEAGFNQMDNQKLPLAPLLRKVISNFDVLAKENFVELGLELETPDLEYSYDPDRMEQVLINLIMNAIRHTGKEGYDGKVILKQTIDVARSNLVITVSDNGSGIAEEDIPYLFERFYKVDKARKRGKAVGTGIGLAIVKNIVEAHNGKISVESELGKGSDFIITLPLYK
4CB0 Chain:A ((70-296))------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------VTALERMMTSQQRL-------LSDISHELRTPLTRLQLGTALLRRRSGESKELER-----IETEAQRLDSMINDLLVMSRNQQK-NALVSETIKANQLWSEVLDNAAFEAEQMGKSLTVNFPPGPWPLYGNPNALESALENIVRNALRYS-------HTKIEVGFAVDKDGITITVDDDGPGVSPEDREQIFRPFYRTDEARDR-ESGGTGLGLAIVETAIQQHRGWVKAEDSPLGGLRLVIWLPLYK


General information:
TITO was launched using:
RESULT:

Template: 4CB0.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -86682 for 1672 contacts (-51.8/contact) +
2D Compatibility (PS) -24275 + (NN) -5796 + (LL) 27736
1D Compatibility (HY) -11200 + (ID) 3550
Total energy: -103767.0 ( -62.06 by residue)
QMean score : 0.472

(partial model without unconserved sides chains):
PDB file : Tito_4CB0.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4CB0-query.scw
PDB file : Tito_Scwrl_4CB0.pdb: