Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MLKIVLVDDEPLILKGLESIIPEFEQSIEIIGTAKNGAVALDLFANQEVDVLLTDIEMPVMNGLELIDEWKKRQPATKTIVLSGFEDFHYVKRGLSAGIENYLLKPLNEQELKETLIQIEKKQMTDSVIPREEAYYILRDNTIWRWLNLRINKEEWEERLALYDMALNPKENAVLIQIQATKEIDLAEWKNLSEQYRKDFSFMLLTPENEIIVGITEQTSISEQILAIHQDMKKRISNEAFYLFISEKVQGEMMYPQAFRQLTRLLPERLVQEPGSLIAYQKRTKHTWRPKRKQHQLAKLLVMNNEKEIKAWINNFFKEWNDHKLESDPHQMLHILNELLVMMAESDPKELSESMGRIAEETSIEGLEEATLAYAIRYYNRKKQTDESKSPIIQNVLSYITEHFAEGMSLKTLGNDFHINAVYLGQLFQKEMGEHFTDYLNRYRVNYAKEELLQTKDNLTIIAGKSGYTDMAYFYRQFKKHTGETPNRYRKIHQ |
1U0S Chain:Y ((4-118)) | --RVLIVDDAAFMRMMLKDIITK--AGYEVAGEATNGREAVEKYKELKPDIVTMDITMPEMNGIDAIKEIMKIDPNAKIIVCSAMGQQAMVIEAIKAGAKDFIVKPFQPSRVVEALNKV--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1U0S.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -67503 for 922 contacts (-73.2/contact) +
2D Compatibility (PS) -12207 + (NN) -5119 + (LL) 31360
1D Compatibility (HY) -9600 + (ID) 1750
Total energy: -64819.0 ( -70.30 by residue)
QMean score : 0.714
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