Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MNSILMNQAIQAFLLEDIGQYDLSAGTVFPRDTMGEGVFLAKETGILCGISIPPKVYELLGGNIQFEAYKKDGDWVQ--KGD----IIAAVKAPVRTLLSGERVILNLMQRMSGIASQTNFAIKQLDDSAIR--ICDTRKTAPGLRAFDKYAVQTGGGFNHRNGLYDGVMLKDNHIAFSGGITSAVSTVRGKLGHMVKIEVETETAEQVKEAVQAGADIIMFDNRTPEEIKQLVKLVPPHITTEISGNVTLENIHRYKGSGANYISLGSLTHSVRAFDISFNSKGGIKA |
| 3C2O Chain:A ((15-290)) | -------QDVTNWLSEDVPSFDF-GGYVVGSD-LKEANLYCKQDGMLCGVPFAQEVFNQC--ELQVEWLFKEGSFLEPSKNDSGKIVVAKITGPAKNILLAERTALNILSRSSGIATASHKIISLARSTGYKGTIAGTRKTTPGLRRLEKYSMLVGGCDTHRYDLSSMVMLKDNHIWATGSITNAVKNARAVCGFAVKIEVECLSEDEATEAIEAGADVIMLDN---------------HFLLECSGGLN-------LCDDIDIYSTSSIHQGTPVIDFSL-------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 3C2O.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -141748 for 1866 contacts (-76.0/contact) +
2D Compatibility (PS) -26296 + (NN) -7278 + (LL) 2080
1D Compatibility (HY) -18800 + (ID) 4450
Total energy: -196492.0 ( -105.30 by residue)
QMean score : 0.351
|
|
|